Study notesΒΆ
- Notes on ATAC-seq, open chromatin, and footprints/motif
- Hosting web server on AWS
- Current observations/claims for CTCF in insulation potency and chromatin interaction
- Duplicated sequences in HBG1/HBG2 promoters
- Duplicated reads, multi-mapped reads
- Notes on python
- R for python people
- Thoughts on HemTools
- bioinformatics
- Chromatin Interaction data analysis
- pegRNA design
- Facts about CRISPR-Cas9
- Docker your applications
- All errors and how it was solved
- Concepts, names, and other small things to remember
- install tensorlfow on stjude HPC
- A very good description of histone marks
- Motif notes
- Python Pandas
- Notes on how to use plink
- Quantify mutations
- All questions and how it was solved
- single-cell RNA-seq analysis
- Using Scanpy to replace pandas
- Published statistics about genome biology