Kmer count over bed¶
https://github.com/CalabreseLab/seekr
seekr_kmer_counts loci.fa -o loci.counts.csv -k 6 -nl -uc -us
I modified the original code so that it can gave me the actual counts.
increment = 1000/length
https://github.com/CalabreseLab/seekr
seekr_kmer_counts loci.fa -o loci.counts.csv -k 6 -nl -uc -us
I modified the original code so that it can gave me the actual counts.
increment = 1000/length